Publications of Dominic Grün
All genres
Journal Article (52)
2018
Journal Article
15, pp. 547 - 553 (2018)
Mapping the physical network of cellular interactions. Nature methods
Journal Article
9, p. 3685 (2018)
GraphDDP: a graph-embedding approach to detect differentiation pathways in single-cell-data using prior class knowledge. Nature Communications
Journal Article
15, pp. 1294 - 1308 (2018)
The Polycomb-Dependent Epigenome Controls β Cell Cysfunction, Dedifferentiation, and Diabetes. Cell Metabolism
Journal Article
1766, pp. 257 - 283 (2018)
High-Throughput Single-Cell RNA Sequencing and Data Analaysis. Methods in Molecular Biology
Journal Article
6, p. 87 (2018)
Unique microglia recovery population revealed by single-cell RNAseq following neurodegeneration. Acta Neuropathologica Communications 2017
Journal Article
20, pp. 793 - 803 (2017)
A new fate mapping system reveals context-dependent random or clonal expansion of microglia. Nature Neuroscience 2016
Journal Article
167, pp. 1264 - 1280 (2016)
DNA Damage Signaling Instructs Polypoid Macrophage Fate in Granulomas. Cell
Journal Article
3, pp. 385 - 394 (2016)
A Single-Cell Transcriptome Atlas of the Human Pancreas. Cell Systems
Journal Article
19, pp. 266 - 277 (2016)
De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data. Cell Stem Cell
Journal Article
36, pp. 36 - 49 (2016)
Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration. Developmental Cell 2015
Journal Article
525, pp. 251 - 255 (2015)
Single-cell mRNA sequencing reveales rare intestinal cell types. Nature 2014
Journal Article
11, pp. 637 - 640 (2014)
Validation of noise models for single-cell transcriptomics enables genome-wiede quentification of stochastic gene expression. Nature methods
Journal Article
6, pp. 565 - 577 (2014)
Conservation of mRNA and protein expression during development of C.elegans. Cell Reports
Journal Article
33, pp. 1751 - 1766 (2014)
Global characterization of the oocyte‐to‐embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism. EMBO Journal
Journal Article
33, pp. 1740 - 1750 (2014)
Paternal RNA contributions of C.elegans zygote. EMBO Journal 2013
Journal Article
45, pp. 1337 - 1344 (2013)
Dampening of expression oscillation by synchronous regulation of a microRNA and its target. Nature Genetics 2012
Journal Article
31, pp. 2755 - 2769 (2012)
Molecular determinants of pluripotency are deeply conserved between mammalian and planarian stem cells. EMBO Journal 2011
Journal Article
21, pp. 1193 - 1120 (2011)
De novo assembly and vailidation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Research
Journal Article
44, pp. 828 - 840 (2011)
In vivo and treanscritopme-wide identification of RNA-binding protein target sites. Molecular Cell 2006
Journal Article
16, pp. 460 - 471 (2006)
A genome-wide map of conserved microRNA targets in C.elegans. Current Biology 2005
Journal Article
1, p. e13 (2005)
microRNA target prediction across seven Drosophila species and comparison to mammalian targets. PLoS Computational Biology
Journal Article
37, pp. 495 - 500 (2005)
Combinatorial microRNA target predictions. Nature Genetics Book Chapter (2)
2019
Book Chapter
Lineage Inference and Stem Cell Identity prediction Using Single-Cell RNA-Sequencing Data. In: Methods in Molecular Biology, pp. 227 - 301. Humana Press, Clifton, N.J. (2019)
2008
Book Chapter
Computional prediction of microRNA targets in vertebrates, fruitflies and nematodes. In: MicroRNAs: From Basic Science to Disease Biology, pp. 172 - 186. Cambridge University Press (2008)