Research

Publications

Journal Article (1316)

2021

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Hensel, N.; Gu, Z.; Sagar, S.; Wieland, D.; Jechow, K.; Kemming, J.; Llewellyn-Lacey, S.; Gostick, E.; Sogukpinar, O.; Emmerich, F. et al.; Price, D. A.; Bengsch, B.; Boettler, T.; Neumann-Haefelin, C.; Eils, R.; Conrad, C.; Bartenschlager, R.; Grün, D.; Ishaque, N.; Thimme, R.; Hofmann, M.: Memory-like HCV-specific CD8 T cells retain a molecular scar after cure of chronic HCV infection. Nature Immunology (2021)
2020

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Edwards-Hicks, J.; Mitterer, M.; Pearce, E. L.; Buescher, J. M.: Metabolic Dynamics of In Vitro CD8+ T Cell Activation. Metabolites 11 (2020)
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Wang, Y.; Zolotarev, N.; Yang, C.-Y.; Rambold, A.; Mittler, G.; Grosschedl, R.: A Prion-like Domain in Transcription Factor EBF1 Promotes Phase Separation and Enables B Cell Programming of Progenitor Chromatin. Immunity 53, pp. 1 - 17 (2020)
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Corrado, M.; Edwards-Hicks, J.; Villa, M.; Flachsmann, L. J.; Sanin, P. D. E.; Jacobs, M.; Baixauli Celda, F.; Stanczak, M.; Anderson, E.; Azuma, M. et al.; Quintana, A.; Jonathan, C.; Clapes, T.; Grzes, K.; Kabat, A.; Ryan, K.; Annette, E. P.; Klein-Geltink, R.; Amulic, B.; Steward, C. G.; Strathdee, D.; Trompouki, E.; O'Sullivan, D.; Pearce, E. J.; Pearce, E. L.: Dynamic Cardiolipin Synthesis Is Required for CD8⁺ T Cell Immunity. Cell Metabolism 32, pp. 981 - 995 (2020)
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Olah, M.; Menon, V.; Habib, N.; Taga, M. F.; Ma, Y.; Yung, C. J.; Cimpean, M.; Khairallah, A.; Coronas-Samano, G.; Sankowski, R. et al.; Grün, D.; Kroshilina, A. A.; Dionne, D.; Sarkis, R. A.; Cosgrove, G. R.; Helgager, J.; Golden, J. A.; Pennell, P. B.; Prinz, M.; Vonsattel, J. P. G.; Teich, A. F.; Schneider, J. A.; Bennett, D. A.; Regev, A.; Elyaman, W.; Bradshaw, E. M.; Jager, P. L. D.: Single cell RNA sequencing of human microglia uncovers a subset associated with Alzheimer's disease. Nature Communications 11, pp. 1 - 18 (2020)
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Swann, J.; Nusser, A.; Ryo, M.; Nagakubo, D.; Boehm, T.: Retracing the evolutionary emergence of thymopoiesis. Science Advances 6, pp. 1 - 14 (2020)
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Choudhuri, A.; Trompouki, E.; Abraham, B. J.; Colli, L. M.; Kock, K. H.; Mallard, W.; Yang, M.-L.; Vinjamur, D. S.; Ghamari, A.; Sporrij, A. et al.; Hoi, K.; Hummel, B.; Boatman, S.; Chan, V.; Tseng, S.; Nandakumar, S. K.; Yang, S.; Lichtig, A.; Superdock, M.; Grimes, S. N.; Bowman, T. V.; Zhou, Y.; Takahashi, S.; Joehanes, R.; Cantor, A. B.; Bauer, D. E.; Ganesh, S. K.; Rinn, J.; Albert, P. S.; Bulyk, M. L.; Chanock, S. J.; Young, R. A.; Zon, L. I.: Common variants in signaling transcription-factor-binding sites drive phenotypic variability in red blood cell traits. Nature Genetics 52, pp. 1333 - 1345 (2020)
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Keller Valsecchi, C. I.; Basilicata, M. F.; Georgiev, P.; Gaub, A.; Seyfferth, J.; Kulkarni, T.; Panhale, A.; Semplicio, G.; Manjunath, V.; Holz, H. et al.; Dasmeh, P.; Akhtar, A.: RNA nucleation by MSL2 induces selective X chromosome compartmentalization. Nature (2020)
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Lefkopoulos, S.; Polyzou, A.; Derecka, M.; Bergo, V.; Clapes, T.; Cauchy, P.; Jerez-Longres, C.; Onishi-Seebacher, M.; Yin, N.; Martagon-Calderón, N.-A. et al.; Potts, K. S.; Klaeylé, L.; Liu, F.; Bowman, T. V.; Jenuwein, T.; Mione, M. C.; Trompouki, E.: Repetitive Elements Trigger RIG-I-like Receptor Signaling that Regulates the emergence of Hematopoietic Stem and Progenitor Cells. Immunity 53, pp. 934 - 951 (2020)
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Kokkaliaris, K. D.; Kunz, L.; Cabezas-Wallscheid, N.; Christodoulou, C.; Renders, S.; Camargo, F.; Trumpp, A.; Scadden, D. T.; Schroeder, T.: Adult blood stem cell localization reflects the abundance of reported bone marrow niche cell types and their combinations. Blood 136, pp. 2296 - 2307 (2020)
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Kucinski, I.; Wilson, N. K.; Hannah, R.; Kinston, S. J.; Cauchy, P.; Lenaerts, A.; Grosschedl, R.; Göttgens, B.: Interactions between lineage-associated transcription factors govern haematopoietic progenitor states. The EMBO Journal, p. e104983 (2020)
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Pessoa Rodrigues, C.; Shvedunova, M.; Akhtar, A.: Epigenetic Regulators as the Gatekeepers of Hematopoiesis. Trends in Genetics 37, pp. 125 - 142 (2020)
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Ferrari, F.; Arrigoni, L.; Franz, H.; Izzo, A.; Butenko, L.; Trompouki, E.; Vogel, T.; Manke, T.: DOT1L-mediated murine neuronal differentiation associates with H3K79me2 accumulation and preserves SOX2-enhancer accessibility. Nature Communications 11, p. 5200 (2020)
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Zeis, P.; Lian, M.; Fan, X.; Herman, J. S.; Hernandez, D. C.; Gentek, R.; Elias, S.; Symowski, C.; Knöpper, K.; Peltokangas, N. et al.; Friedrich, C.; Doucet-Ladeveze, R.; Kabat, A. M.; Locksley, R. M.; Voehringer, D.; Bajenoff, M.; Rudensky, A. Y.; Romagnani, C.; Grün, D.; Gasteiger, G.: In situ Maturation and Tissue Adaptation of Type 2 Innate Lymphoid Cell Progenitors. Immunity 53, pp. 775 - 792 (2020)
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Carrasco, J.; Rauer, M.; Hummel, B.; Grzejda, D.; Alfonso-Gonzalez, C.; Lee, Y.; Wang, Q.; Puchalska, M.; Mittler, G.; Hilgers, V.: ELAV and FNE Determine Neuronal Transcript Signatures through EXon-Activated Rescue. Molecular Cell 80, pp. 156 - 163 (2020)
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Iwanami, N.; Lawir, D.-F.; Sikora, K.; Meara, C. O.; Takeshita, K.; Schorpp, M.; Boehm, T.: Transgenerational inheritance of impaired larval T cell development in zebrafish. Nature Communications 11, p. 4505 (2020)
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Carrelha, J.; Lin, D. S.; Rodriguez-Fraticelli, A. E.; Luis, T. C.; Wilkinson, A. C.; Cabezas-Wallscheid, N.; Tremblay, C. S.; Haas, S.: Single-cell lineage tracing approaches in hematology research - technical consideration. Experimental Hematology 89, pp. 26 - 36 (2020)
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Kury, P.; Führer, M.; Fuchs, S.; Lorenz, M. R.; Giorgetti, O. B.; Bakhtiar, S.; Frei, A. P.; Fisch, P.; Boehm, T.; Schwarz, K. et al.; Speckmann, C.; Ehl, S.: Long-term robustness of a T-cell system emerging from somatic rescue of a genetic block in T-cell development. EBioMedicine 59, pp. 1 - 12 (2020)
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Kelly, B.; Pearce, E. L.: Amino Assets: How Amino Acids Support Immunity. Cell Metabolism 32 (2020)
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Klein-Geltink, R.; Edwards-Hicks, J.; Apostolova, P.; O'Sullivan, D.; Sanin, P. D. E.; Annette, E. P.; Puleston, D.; Ligthart, N. A. M.; Büscher, J. M.; Grzes, K. et al.; Kabat, A.; Stanczak, M.; Curtis, J.; Hässler, F.; Uhl, F. M.; Fabri, M.; Zeiser, R.; Pearce, E. J.; Pearce, E. L.: Metabolic conditioning of CD8⁺ effector T cells for adoptive cell therapy. Nature Metabolism (2020)
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Trancoso, I.; Ryo, M.; Boehm, T.: Co-evolution of mutagenic genome deditors and vertebrate adaptive immunity. Current Opinion in Immunology 65, pp. 32 - 41 (2020)
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Wiese, M.; Bannister, A. J.: Two genomes, one cell: Mitochondrial-nuclear coordination via epigenetic pathways. Molecular Metabolism 38, pp. 1 - 16 (2020)
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Woyciechowski, S.; Weißert, K.; Ammann, S.; Aichele, P.; Pircher, H.: NK1.1⁺ innate lymphoid cells in salivary glands inhibit establishment of tissue-resident memory CD8⁺ T cells in mice. Eur j Immunol 50, pp. 1952 - 1958 (2020)
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Swann, J.; Holland, S. J.; Petersen, M.; Pietsch, T. W.; Boehm, T.: The immunogenetics of sexual parasitism. Science, p. eaaz9445 (2020)
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Iwanami, N.; Takeshita, K.; Lawir, D.-F.; Suetake, I.; Tajima, S.; Sikora, K.; Trancoso, I.; O'Meara, C.; Siamishi, I.; Takahama, Y. et al.; Furutani-Seiki, M.; Kondoh, H.; Yonezawa, Y.; Schorpp, M.; Boehm, T.: Epigenetic Protection of Vertebrate Lymphoid Progenitor Cells by Dnmt1. iScience 23, pp. 1 - 15 (2020)
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Samata, M.; Alexia, A.; Richard, G.; Georgiev, P.; Nuebler, J.; Kulkarni, T.; Renschler, G. V.; Basilicata, M. F.; Zenk, F. L.; Shvedunova, M. et al.; Semplicio, G.; Mirny, L.; Iovino, N.; Akhtar, A.: Intergenerationally Maintained Histone H4 Lysine 16 Acetylation Is Instructive for Future Gene Activation. Cell 182, pp. 127 - 144 (2020)
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Hua, G.; Bergon, A.; Cauchy, P.; Kahn-Perlès, B.; Bertucci, F.; Birnbaum, D.; Benkirane-Jessel, N.; Imbert, J.: ERBB2b mRNA isoform encodes a nuclear variant of the ERBB2 oncogene in breast cancer. Journal of Cellular Biochemistry 121, pp. 4870 - 4886 (2020)
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Haring, E.; Uhl, F. M.; Andrieux, G.; Proietti, M.; Bulashevska, A.; Sauer, B.; Braun, L. M.; de Gomez, E. V.; Esser, P. R.; Martin, S. F. et al.; Pfeifer, D.; Follo, M.; Schmitt-Graeff, A.; Büscher, J. M.; Duyster, J.; Grimbacher, B.; Boerries, M.; Pearce, E. L.; Zeiser, R.; Apostolova, P.: Bile acids regulate intestinal antigen presentation and reduce graft-versus-host disease without impairing the graft-versus-leukemia effect. Haematologica (2020)
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Böckelmann, L. C.; Basu, T.; Gründer, A.; Wang, W.; Breucker, J.; Kaiser, S.; Pichler, A.; Pahl, H. L.: Concomitant constitutive LNK and NFE2 mutation with loss of sum9oylation in a case of hereditary thrombocythemia. Haematologica (2020)
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Siamishi, I.; Iwanami, N.; Clapes, T.; Trompouki, E.; O'Meara, C. P.; Boehm, T.: Lymphocyte-Specific Function of the DNA Plymerase Epsilon Subunit Pole3 Revealed by Neomorphic Alleles. Cell Reports 31, p. 107756 (2020)