Publications

Zolotarev, N.; Bayer, M.; Grosschedl, R.: EBF1 is continuously required for stabilizing local chromatin accessibility in pro-B cells. Proceedings of the National Academy of Sciences of the United States of America 119, e2210595119 (2022)

Andreani, V.; Ramamoorthy, S.; Fässler, R.; Grosschedl, R.: Integrin β1 regulates marginal zone B cell differentiation and PI3K signaling. Journal of Experimental Medicine 220, e20220342 (2022)

Carrasco, J.; Mateos, F.; Hilgers, V.: A critical developmental window for ELAV/Hu-dependent mRNA signatures at the onset of neuronal differentiation. Cell Reports 41, 111542 (2022)

Giorgetti, O. B.; Nusser, A.; Boehm, T.: Human thymoma-associated mutation of the GTF2I transcription factor impairs thymic epithelial progenitor differentiation in mice. Communications Biology 5, 1037 (2022)

Grzejda, D.; Mach, J.; Schweizer, J. A.; Hummel, B.; Rezansoff, A. M.; Eggenhofer, F.; Panhale, A.; Lalioti, M.-E.; Cabezas-Wallscheid, N.; Backofen, R. et al.; Felsenberg, J.; Hilgers, V.: The long noncoding RNA mimi scaffolds neuronal granules to maintain nervous system maturity. Science Advances 8, eabo5578 (2022)

Bayer, M.; Boller, S.; Ramamoothy, S.; Zolotarev, N.; Cauchy, P.; Iwanami, N.; Mittler, G.; Boehm, T.; Grosschedl, R.: Tnpo3 enables EBF1 function in conditions of antagonistic Notch signaling. Genes and Development 36, pp. 901 - 915 (2022)

Iwanami, N.; Petersen, M.; Diekhoff, D.; Boehm, T.: Clonal dynamics underlying the skewed CD4/CD8 ratio of mouse thymocytes revealed by TCR-independent barcoding. Communications Biology 5, 911 (2022)

Lenaerts, A.; Kucinski, I.; Deboutte, W.; Derecka, M.; Cauchy, P.; Manke, T.; Göttgens, B.; Grosschedl, R.: EBF1 primes B-lymphoid enhancers and limits the myeloid bias in murine multipotent progenitors. Journal of Experimental Medicine 219, e20212437 (2022)

Nagakubo, D.; Hirakawa, M.; Iwanami, N.; Boehm, T.: Limits to in vivo fate changes of epithelia in thymus and parathyroid by ectopic expression of transcription factors Gcm2 and Foxn1. Scientific Reports 12, 13554 (2022)

Schuster, E.-M.; Epple, M. W.; Glaser, K. M.; Mihlan, M.; Lucht, K.; Zimmermann, J. A.; Bremser, A.; Polyzou, A.; Obier, N.; Cabezas-Wallscheid, N. et al.; Trompouki, E.; Ballabio, A.; Vogel, J.; Büscher, J. M.; Westermann, A. J.; Rambold, A.: TFEB induces mitochondrial itaconate synthesis to suppress bacterial growth in macrophages. Nature Metabolism (2022)

Mihlan, M.; Safaiyan, S.; Stecher, M.; Paterson, N.; Lämmermann, T.: Surprises from Intravital Imaging of the Innate Immune Response. Annual Review of Cell and Developmental Biology 38, pp. 18.1 - 18.23 (2022)

Qiu, Z.; Guo, W.; Dong, B.; Wang, Y.; Deng, P.; Wang, C.; Liu, J.; Zhang, Q.; Grosschedl, R.; Yu, Z. et al.; Deng, J.; Wu, Y.: EBF1 promotes triple-negative breast cancer progression by surveillance of the HIF1α pathway. Proceedings of the National Academy of Sciences of the United States of America 119, e2119518119 (2022)

Zhang, Y. W.; Mess, J.; Aizarani, N.; Mishra, P.; Johnson, C.; Romero-Mulero, M. C.; Rettkowski, J.; Schönberger, K.; Obier, N.; Jäcklein, K. et al.; Woessner, N. M.; Lalioti, M.-E.; Velasco-Hernandez, T.; Sikora, K.; Wäsch, R.; Lehnertz, B.; Sauvageau, G.; Manke, T.; Menendez, P.; Walter, S. G.; Minguet, S.; Laurenti, E.; Günther, S.; Grün, D.; Cabezas-Wallscheid, N.: Hyaluronic acid–GPRC5C signalling promotes dormancy in haematopoietic stem cells. Nature Cell Biology (2022)

Schönberger, K.; Mitterer, M.; Büscher, J. M.; Cabezas-Wallscheid, N.: Targeted LC-MS/MS-based metabolomics and lipidomics on limited hematopoietic stem cell numbers. STAR Protocols 3, 101408 (2022)

Nusser, A.; Sagar; Swann, J.; Krauth, B.; Diekhoff, D.; Calderon, L.; Happe, C.; Grün, D.; Boehm, T.: Developmental dynamics of two bipotent thymic epithelial progenitor types. Nature (2022)

Hilgers, V.: Regulation of neuronal RNA signatures by ELAV/Hu proteins. Wiley interdisciplinary reviews: WIREs RNA, e1733 (2022)

Eilertz, D.; Mitterer, M.; Büscher, J. M.: automRm: An R Package for Fully Automatic LC-QQQ-MS Data Preprocessing Powered by Machine Learning. Analytical Chemistry (2022)

Jünger, F.; Ruh, D.; Strobel, D.; Michiels, R.; Huber, D.; Brandel, A.; Madl, J.; Gavrilov, A.; Mihlan, M.; Daller, C. C. et al.; Rog-Zielinska, E. A.; Römer, W.; Lämmermann, T.; Rohrbach, A.: 100 Hz ROCS microscopy correlated with fluorescence reveals cellular dynamics on different spatiotemporal scales. Nature Communications 13, 1758 (2022)

Spohr, C.; Poggio, T.; Andrieux, G.; Schönberger, K.; Cabezas-Wallscheid, N.; Boerries, M.; Halbach, S.; Illert, A. L.; Brummer, T.: Gab2 deficiency prevents Flt3-ITD driven acute myeloid leukemia in vivo. Leukemia: the Journal of Normal and Malignant Hemopoiese ; Official Journal of the Leukemia Research Fund U.K. 36, pp. 970 - 982 (2022)

Seung, H.; Wrobel, J.; Wadle, C.; Bühler, T.; Chiang, D.; Rettkowski, J.; Cabezas-Wallscheid, N.; Hechler, B.; Stachon, P.; Maier, A. et al.; Weber, C.; Wolf, D.; Duerschmied, D.; Idzko, M.; Bode, C.; von Mühlen, C. z.; Hilgendorf, I.; Heidt, T.: P2Y₁₂-dependent activation of hematopoietic stem and progenitor cells promotes emergency hematopoiesis after myocardial infarction. Basic Research in Cardiology 117, 16 (2022)

Paterson, N.; Lämmermann, T.: Macrophage network dynamics depend on haptokinesis for optimal local surveillance. eLife 11, e75354, pp. 1 - 32 (2022)

Bayer, M.; Grosschedl, R.: How to resist Notch-targeted T-leukemia therapy: Lineage- and MYC enhancer switch. Molecular Cell 82, pp. 884 - 886 (2022)

Mossad, O.; Batut, B.; Yilmaz, B.; Dokalis, N.; Mezö, C.; Nent, E.; Nabavi, L. S.; Mayer, M.; Maron, F. J. M.; Büscher, J. M. et al.; de Agüero, M. G.; Szalay, A.; Lämmermann, T.; Macpherson, A. J.; Ganal-Vonarburg, S. C.; Backofen, R.; Erny, D.; Prinz, M.; Blank, T.: Gut microbiota drives age-related oxidative stress and mitochondrial damage in microglia via the metabolite N⁶-carboxymethyllysine. Nature Neuroscience 25, pp. 295 - 305 (2022)

Shvedunova, M.; Akhtar, A.: Modulation of cellular processes by histone and non-histone protein acetylation. Nature Reviews Molecular Cell Biology (2022)

Schönberger, K.; Obier, N.; Romero-Mulero, M. C.; Cauchy, P.; Mess, J.; Pavlovich, P. V.; Zhang, Y. W.; Mitterer, M.; Rettkowski, J.; Lalioti, M.-E. et al.; Jäcklein, K.; Curtis, J. D.; Féret, B.; Sommerkamp, P.; Morganti, C.; Ito, K.; Ghyselinck, N. B.; Trompouki, E.; Büscher, J. M.; Pearce, E. L.; Cabezas-Wallscheid, N.: Multilayer omics analysis reveals a non-classical retinoic acid signaling axis that regulates hematopoietic stem cell identity. Cell Stem Cell 29, pp. 131 - 148 (2022)

Groß, M.; Speckmann, C.; May, A.; Gajardo-Carrasco, T.; Wustrau, K.; Maier, S. L.; Panning, M.; Huzly, D.; Agaimy, A.; Bryceson, Y. T. et al.; Choo, S.; Chow, C. W.; Dückers, G.; Fasth, A.; Fraitag, S.; Gräwe, K.; Haxelmans, S.; Holzinger, D.; Hudowenz, O.; Hübschen, J.; Khurana, C.; Kienle, K.; Klifa, R.; Korn, K.; Kutzner, H.; Lämmermann, T.; Ledig, S.; Lipsker, D.; Meeths, M.; Naumann-Bartsch, N.; Rascon, J.; Schänzer, A.; Seidl, M.; Tesi, B.; Vauloup-Fellous, C.; Vollmer-Kary, B.; Warnatz, K.; Wehr, C.; Neven, B.; Vargas, P.; Sepulveda, F. E.; Lehmberg, K.; Schmitt-Gräff, A.; Ehl, S.: Rubella vaccine-induced granulomas are a novel phenotype with incomplete penetrance of genetic defects in cytotoxicity. The journal of allergy and clinical immunology: official publication of the American Academy of Allergy, Asthma and Immunology 149, pp. 388 - 399 (2022)

Mossad, O.; Nent, E.; Woltemate, S.; Folschweiller, S.; Büscher, J. M.; Schnepf, D.; Erny, D.; Staeheli, P.; Bartos, M.; Szalay, A. et al.; Stecher, B.; Vital, M.; Sauer, J. F.; Lämmermann, T.; Prinz, M.; Blank, T.: Microbiota-dependent increase in δ-valerobetaine alters neuronal function and is responsible for age-related cognitive decline. Nature aging 1, pp. 1127 - 1136 (2021)

Challen, G. A.; Pietras, E. M.; Cabezas-Wallscheid, N.; Signer, R. A. J.: Simplified murine multipotent progenitor isolation scheme: Establishing a consensus approach for multipotent progenitor identification. Experimental Hematology 104, pp. 55 - 63 (2021)

Ibarra-Morales, D.; Rauer, M.; Quarato, P.; Rabbani, L.; Zenk, F.; Schulte-Sasse, M.; Cardamone, F.; Gomez-Auli, A.; Cecere, G.; Iovino, N.: Histone variant H2A.Z regulates zygotic genome activation. Nature Communications 12, 7002 (2021)

Castro Alvarez, J. J.; Revel, M.; Carrasco Sala, J.; Cléard, F.; Pauli, D.; Hilgers, V.; Karch, F.; Maeda, R. K.: Repression of the Hox gene abd-A by ELAV-mediated Transcriptional Interference. PLoS Genetics 17 (11), e1009843 (2021)