Publications of Pierre Cauchy

Journal Article (17)

2022
Journal Article
Pavlovich, P. V.; Cauchy, P.: Sequences to Differences in Gene Expression: Analysis of RNA-Seq Data. Methods in Molecular Biology 2508, pp. 279 - 318 (2022)
Journal Article
Schönberger, K.; Obier, N.; Romero-Mulero, M. C.; Cauchy, P.; Mess, J.; Pavlovich, P. V.; Zhang, Y. W.; Mitterer, M.; Rettkowski, J.; Lalioti, M.-E. et al.; Jäcklein, K.; Curtis, J. D.; Féret, B.; Sommerkamp, P.; Morganti, C.; Ito, K.; Ghyselinck, N. B.; Trompouki, E.; Büscher, J. M.; Pearce, E. L.; Cabezas-Wallscheid, N.: Multilayer omics analysis reveals a non-classical retinoic acid signaling axis that regulates hematopoietic stem cell identity. Cell Stem Cell 29, pp. 131 - 148 (2022)
2020
Journal Article
Lefkopoulos, S.; Polyzou, A.; Derecka, M.; Bergo, V.; Clapes, T.; Cauchy, P.; Jerez-Longres, C.; Onishi-Seebacher, M.; Yin, N.; Martagon-Calderón, N.-A. et al.; Potts, K. S.; Klaeylé, L.; Liu, F.; Bowman, T. V.; Jenuwein, T.; Mione, M. C.; Trompouki, E.: Repetitive Elements Trigger RIG-I-like Receptor Signaling that Regulates the emergence of Hematopoietic Stem and Progenitor Cells. Immunity 53, pp. 934 - 951 (2020)
Journal Article
Kucinski, I.; Wilson, N. K.; Hannah, R.; Kinston, S. J.; Cauchy, P.; Lenaerts, A.; Grosschedl, R.; Göttgens, B.: Interactions between lineage-associated transcription factors govern haematopoietic progenitor states. The EMBO Journal 39, e104983 (2020)
Journal Article
Hua, G.; Bergon, A.; Cauchy, P.; Kahn-Perlès, B.; Bertucci, F.; Birnbaum, D.; Benkirane-Jessel, N.; Imbert, J.: ERBB2b mRNA isoform encodes a nuclear variant of the ERBB2 oncogene in breast cancer. Journal of Cellular Biochemistry 121, pp. 4870 - 4886 (2020)
Journal Article
Derecka, M.; Herman, J. S.; Cauchy, P.; Ramamoorthy, S.; Lupar, E.; Grün, D.; Grosschedl, R.: EBF1-deficient bone marrow stroma elicits persistent changes in HSC potential. Nature 21, pp. 261 - 273 (2020)
Journal Article
Ward, C.; Cauchy, P.; Garcia, P.; Frampton, J.; Esteban, M. A.; Volpe, G.: High WBP5 expression correlates with elevation of HOX genes levels and is associated with inferior survival in patients with acute myeloid leukaemia. Scientific Reports 10, p. 13109 (2020)
2019
Journal Article
Cauchy, P.; Kahn-Perlès, B.; Ferrier, P.; Imbert, J.; Lécine, P.: 2HybridTools, a handy software to facilitate clone identification and mutation mapping from yeast two-hybrid screening. PeerJ 7, 7245 (2019)
Journal Article
Assi, S. A.; Imperato, M. R.; Coleman, D. J. L.; Pickin, A.; Potluri, S.; Ptasinska, A.; Chin, P. S.; Blair, H.; Cauchy, P.; James, S. R. et al.; Zacarias-Cabeza, J.; Gilding, L. N.; Beggs, A.; Clokie, S.; Loke, J. C.; Jenkin, P.; Uddin, A.; Delwel, R.; Richards, S. J.; Raghavan, M.; Griffiths, M. J.; Heidenreich, O.; Cockerill, P. N.; Bonifer, C.: Subtype-specific regulatory network rewiring in acute myeloid leukemia. Nature Genetics 51, pp. 151 - 162 (2019)
Journal Article
Volpe, G.; Cauchy, P.; Walton, D. S.; Ward, C.; Blakemore, D.; Bayley, R.; Clarke, M. L.; Schmidt, L.; Nerlov, C.; Garcia, P. et al.; Dumon, S.; Grebien, F.: Dependence on Myb expression is attenuated in myeloid leukaemia with N-terminal CEBPA mutations. Life science alliance 2, p. e201800207 (2019)
2018
Journal Article
Edginton-White, B.; Cauchy, P.; Assi, S. A.; Hartmann, S.; Mathas, S.; Cockerill, P. N.; Bonifer, C.: Global long terminal repeat activation participates in establishing the unique gene expression programme of classical Hodgkin lymphoma. Leukemia: the Journal of Normal and Malignant Hemopoiese ; Official Journal of the Leukemia Research Fund U.K. (2018)
Journal Article
Ward, C.; Volpe, G.; Cauchy, P.; Ptasinska, A.; Almaghrabi, R.; Blakemore, D.; Nafria, M.; Kestner, D.; Frampton, J.; Murphy, G. et al.; Buganim, Y.; Kaji, K.; García, P.: Fine-Tuning Mybl2 is Required for Proper Mesenchymal-to-Epithelial Transition during somatic Reprogramming. Cell Reports 24, pp. 1496 - 1511 (2018)
Journal Article
Rosa, F.; Rameil, P.; Algarté-Génin, M.; Bedotto, M.; Ferrier , P.; Cauchy, P.; Imbert, J.: Identification of Two Novel Regulatory Elements in the IL2RA Gene Locus. Journal of Pulmonary & Respiratory Medicine 8, p. 1000458 (2018)
Journal Article
Li , R.; Cauchy, P.; Ramamoorthy, S.; Boller, S.; Chevez, L.; Grosschedl, R.: Dynamic EBF1 occupancy directs sequential epigenetic and transcriptional events in B-cell programming. Genes and Development 32, pp. 96 - 111 (2018)
Journal Article
Piragyte, I.; Clapes, T.; Polyzou, A.; Geltink, R. I. K.; Lefkopoulos, S.; Yin, N.; Cauchy, P.; Curtis, J. D.; Klaeylé, L.; Langa, X. et al.; Beckmann, C. C. A.; Wlodarski, M. W.; Müller, P.; Essen, D. V.; Rambold, A.; Kapp, F. G.; Mione, M.; Buescher, J. M.; Pearce, E. L.; Polyzos, A.; Trompouki, E.: A metabolic interplay coordinatd by HLX regulates myeloid differentiation and AML through partly overlapping pathways. Nature Communications 9, p. 3090 (2018)
2017
Journal Article
Cauchy, P.: Delineating the Transcriptional Mechanisms in Immunity behind Allergy and Asthma: Milestones and Challenges Ahead. International Journal of Allergy & Asthma, pp. 1 - 15 (2017)
Journal Article
Cauchy, P.; Koch, F.; Andrau, J.-C.: Two possible modes of pioneering associated with combination of H2A.Z and p300/CBP at nucleosome-occupied enhancers. Transcription 8, pp. 179 - 184 (2017)
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