Publikationen
Labor Dominic Grün
Zeitschriftenartikel (54)
2024
16, eadi1501 (2024)
Lipocalin-2 expression identifies an intestinal regulatory neutrophil population during acute graft-versus-host disease. Science translational medicine: integrating medicine and science / American Association for the Advancement of Science 2022
12, 21401 (2022)
Stage-specific and cell type-specific requirements of ikzf1 during haematopoietic differentiation in zebrafish. Scientific Reports 7, eadd3263 (2022)
Resident TH2 cells orchestrate adipose tissue remodeling at a site adjacent to infection. Science Immunology 24, S. 1038 - 1048 (2022)
Hyaluronic acid–GPRC5C signalling promotes dormancy in haematopoietic stem cells. Nature Cell Biology 606, S. 165 - 171 (2022)
Developmental dynamics of two bipotent thymic epithelial progenitor types. Nature 34, S. 516 - 532 (2022)
The glucose transporter GLUT3 controls T helper 17 cell responses through glycolytic-epigenetic reprogramming. Cell Metabolism 2021
22, S. 1256 - 1267 (2021)
Effector differentiation downstream of lineage commitment in ILC1s is driven by Hobit across tissues. Nature Immunology 23, S. 704 - 717 (2021)
Chemotherapy-induced transposable elements activate MDA5 to enhance haematopoietic regeneration. Nature Cell Biology 22, S. 229 - 239 (2021)
Memory-like HCV-specific CD8+ T cells retain a molecular scar after cure of chronic HCV infection. Nature Immunology 148, dev193789 (2021)
Spatiotemporal sequence of mesoderm and endoderm lineage segregation during mouse gastrulation. Development 2020
11, S. 1 - 18 (2020)
Single cell RNA sequencing of human microglia uncovers a subset associated with Alzheimer's disease. Nature Communications 53, S. 775 - 792 (2020)
In situ Maturation and Tissue Adaptation of Type 2 Innate Lymphoid Cell Progenitors. Immunity 39, e104159 (2020)
Deciphering the regulatory landscapte of fetal and adult γδ T-cell development at single-cell resolution. The EMBO Journal 22, S. 828 - 841 (2020)
Neural metabolic imbalance induced by MOF dysfunction triggers pericyte activation and breakdown of vasculature. Nature Cell Biology 38, S. 747 - 755 (2020)
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects. Nature Biotechnology 39, S. 1 - 22 (2020)
Deciphering Cell Fate Decision by Integrated Single-Cell Sequencing Analysis. Annual Review of Biomedical Data Science 21, S. 261 - 273 (2020)
EBF1-deficient bone marrow stroma elicits persistent changes in HSC potential. Nature 17, S. 45 - 49 (2020)
Revealing dynamics of gene expression variability in cell state space. Nature methods 34, S. 1503 - 1519 (2020)
EBF1 and Pax5 safeguard leukemic transformation by limiting IL-7 signaling, Myc expression, and folate metabolism. Genes and Development 6, S. eaaz4815 (2020)
Temporal expression of MOF acetyltransferase primes transcription factor networks for erythroid fate. Science Advances 2019
8, S. e50163 (2019)
Single-cell analysis uncovers that metabolic reprogramming by ErbB2 signaling is essential for cardiomyocyte proliferation in the regenerating heart. eLife 22, S. 2098 - 2110 (2019)
Mapping microglia states in the human brain through the integration of high-dimensional techniques. Nature Neuroscience 21, S. 273 - 287 (2019)
Systematic Identification of Cell-Cell Communication Networks in the Developing Brain. iScience 13, S. 257 - 270 (2019)
Single-cell RNA-sequencing identifies the developmental trajectory of C-Myc-dependent NK1.1-T-bet+. Mucosal immunology: official journal of the Society for Mucosal Immunology 572, S. 199 - 204 (2019)
A human liver cell atlas reveals heterogeneity and epithelial progenitors. Nature 566, S. 388 - 392 (2019)
Spatial and temporal heterogeneity of mouse and human microglia at single-cell resolution. Nature 363 (2019)
Single-cell profiling identifies myeloid cell subsets with distinct fates during neuro inflammation. Science 50, S. 1482 - 1497 (2019)
A Subset of Skin Macrophages Contributes to the Seruveillance and Regeneration of Local Nerves. Immunity 2018
11, S. 9 - 17 (2018)
Revealing routes of cellular differentiation by single-cell RNA-seq. Current Opinion in Systems Biology 46, S. 285 - 301 (2018)
Tdrd6a Regulates the Aggregation of Buc into Functional Subcellular Compartments that Drive Germ Cell Specification. Developmental Cell 15, S. 379 - 386 (2018)
FateID infers fate bias in multipotent progenitors from single-cell RNA-seq data. Nature methods 67, S. 784 - 787 (2018)
Zooming in on Liver Zonation. Hepatology 15, S. 547 - 553 (2018)
Mapping the physical network of cellular interactions. Nature methods 9, S. 3685 (2018)
GraphDDP: a graph-embedding approach to detect differentiation pathways in single-cell-data using prior class knowledge. Nature Communications 15, S. 1294 - 1308 (2018)
The Polycomb-Dependent Epigenome Controls β Cell Cysfunction, Dedifferentiation, and Diabetes. Cell Metabolism 1766, S. 257 - 283 (2018)
High-Throughput Single-Cell RNA Sequencing and Data Analaysis. Methods in Molecular Biology 6, S. 87 (2018)
Unique microglia recovery population revealed by single-cell RNAseq following neurodegeneration. Acta Neuropathologica Communications 2017
20, S. 793 - 803 (2017)
A new fate mapping system reveals context-dependent random or clonal expansion of microglia. Nature Neuroscience 2016
167, S. 1264 - 1280 (2016)
DNA Damage Signaling Instructs Polypoid Macrophage Fate in Granulomas. Cell 3, S. 385 - 394 (2016)
A Single-Cell Transcriptome Atlas of the Human Pancreas. Cell Systems 19, S. 266 - 277 (2016)
De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data. Cell Stem Cell 36, S. 36 - 49 (2016)
Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration. Developmental Cell 2015
525, S. 251 - 255 (2015)
Single-cell mRNA sequencing reveales rare intestinal cell types. Nature 2014
11, S. 637 - 640 (2014)
Validation of noise models for single-cell transcriptomics enables genome-wiede quentification of stochastic gene expression. Nature methods 6, S. 565 - 577 (2014)
Conservation of mRNA and protein expression during development of C.elegans. Cell Reports 33, S. 1751 - 1766 (2014)
Global characterization of the oocyte‐to‐embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism. EMBO Journal 33, S. 1740 - 1750 (2014)
Paternal RNA contributions of C.elegans zygote. EMBO Journal 2013
45, S. 1337 - 1344 (2013)
Dampening of expression oscillation by synchronous regulation of a microRNA and its target. Nature Genetics 2012
31, S. 2755 - 2769 (2012)
Molecular determinants of pluripotency are deeply conserved between mammalian and planarian stem cells. EMBO Journal 2011
21, S. 1193 - 1120 (2011)
De novo assembly and vailidation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Research 44, S. 828 - 840 (2011)
In vivo and treanscritopme-wide identification of RNA-binding protein target sites. Molecular Cell 2006
16, S. 460 - 471 (2006)
A genome-wide map of conserved microRNA targets in C.elegans. Current Biology 2005
1, S. e13 (2005)
microRNA target prediction across seven Drosophila species and comparison to mammalian targets. PLoS Computational Biology 37, S. 495 - 500 (2005)
Combinatorial microRNA target predictions. Nature Genetics Buchkapitel (2)
2019
Lineage Inference and Stem Cell Identity prediction Using Single-Cell RNA-Sequencing Data. In: Methods in Molecular Biology, S. 227 - 301. Humana Press, Clifton, N.J. (2019)
2008
Computional prediction of microRNA targets in vertebrates, fruitflies and nematodes. In: MicroRNAs: From Basic Science to Disease Biology, S. 172 - 186. Cambridge University Press (2008)