Journal Article (68)

2018
Journal Article
Aleksandrova, N.; Gutsche, I.; Kandiah, E.; Avilov, S.; Petoukhov, M. V.; Seiradake, E.; McCarthy, A. A.: Robo1 Forms a Compact Dimer-of-Dimers Assembly. Structure 26, pp. 320 - 328 (2018)
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Felmlee, D. J.; Baumert, T. F.; Grün, D.: Zooming in on Liver Zonation. Hepatology 67, pp. 784 - 787 (2018)
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Vincenz-Donnelly, L.; Holthusen, H.; Körner, R.; Hansen, E. C.; Presto, J.; Johansson, J.; Sawarkar, R.; Hartl, F. U.; Hipp, M. S.: High capacity of the endoplasmic reticulum to prevent secretion and aggregation of amyloidogenic proteins. The EMBO Journal 37 (3), pp. 337 - 350 (2018)
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Tenno, M.; Kojo, S.; Lawir, D.-F.; Hess, I.; Shiroguchi, K.; Ebihara, T.; Endo, T. A.; Muroi, S.; Satoh, R.; Kawamoto, H. et al.; Boehm, T.; Taniuchi, I.: Cbfβ2 controls differentiation of and confers homing capacity to prethymic progenitors. Journal of Experimental Medicine 215, pp. 595 - 610 (2018)
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Li , R.; Cauchy, P.; Ramamoorthy, S.; Boller, S.; Chevez, L.; Grosschedl, R.: Dynamic EBF1 occupancy directs sequential epigenetic and transcriptional events in B-cell programming. Genes and Development 32, pp. 96 - 111 (2018)
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Ramirez, F.; Bhardwaj, V.; Arrigoni, L.; Lam, K. C.; Grüning, B. A.; Villaveces, J.; Habermann, B.; Akhtar, A.; Manke, T.: High-resolution TADs reveal DNA sequences underlying genome organization in flies. Nature Communications 9, p. 189 (2018)
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Santos-Barriopedro, I.; Bosch-Presegue, L.; Marazuela-Duque, A.; de la Torre, C.; Colomer, C.; Vazquez, B. N.; Fuhrmann, T.; Martinez-Pastor, B.; Lu, W.; Braun, T. et al.; Bober, E.; Jenuwein, T.; Serrano, L.; Esteller, M.; Chen, Z.; Barcelo-Batllori, S.; Mostoslavsky, R.; Espinosa, L.; Vaquero, A.: SIRT6-dependent cysteine monoubiquitination in the PRE-SET domain of Suv39h1 regulates the NF-kappa B pathway. Nature Communications 9, 101 (2018) (2018)
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Obier, N.; Cauchy, P.: Polycomb at the Crossroads: An Integrated Model with LncRNA- and Silencer-mediated Repression. Journal of RNA and Genomics 14, pp. 592 - 605 (2018)
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Andreani, V.; Ramamoorthy, S.; Pandey, A.; Lupar, E.; Nutt, S. L.; Lämmermann, T.; Grosschedl, R.: Cochaperone Mzb1 is a key effector of Blimp1 in plasma cell differentiation and β1-integrin function. Proceedings of the National Academy of Sciences of the United States of America 115, pp. E9630 - E9639 (2018)
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Arrigoni, L.; Al-Hasani, H.; Ramírez, F.; Panzeri, I.; Ryan, D. P.; Santacruz, D.; Kress, N.; Pospisilik, J. A.; Bönisch, U.; Manke, T.: RELACS nuclei barcoding enables high-throughput ChIP-seq. Communications Biology 214 (2018)
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Boehm, T.; Hirano, M.; Holland, S. J.; Das, S.; Schorpp, M.; Cooper, M. D.: Evolution of Alternative Adaptive Immune Systems in Vertebrates. Annual Review of Immunology 36, pp. 19 - 42 (2018)
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Boisset, J.-C.; Vivie, J.; Grün, D.; Muraro, M. J.; Lyubimova, A.; van Oudenaarden, A.: Mapping the physical network of cellular interactions. Nature methods 15, pp. 547 - 553 (2018)
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Cohen, S.; Rambold, A.; Lippincott-Schwartz, J.: Mitochondrial and Lipid Droplet Dynamics Regulate Intra- and Intercellular Fatty Acid Trafficking. Molecular and Cellular Oncology 5, p. e1043038 (2018)
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Costa , F.; Grün, D.; Backofen, R.: GraphDDP: a graph-embedding approach to detect differentiation pathways in single-cell-data using prior class knowledge. Nature Communications 9, p. 3685 (2018)
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Franz, H.; Villarreal, A.; Heidrich, S.; Videm, P.; Kilpert, F.; Mestres, I.; Calegari, F.; Backofen, R.; Manke, T.; Vogel, T.: DOT1L promotes progenitor proliferation and primes neuronal layer identity in the developing cerebral cortex. Nucleic Acids Research (London) (2018)
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Giaimo, B. D.; Ferrante, F.; Vallejo, D. M.; Hein, K.; Gutierrez-Perez, I.; Nist, A.; Stiewe, T.; Mittler, G.; Herold, S.; Zimmermann, T. et al.; Bartkuhn, M.; Schwarz, P.; Oswald, F.; Dominguez, M.; Borggrefe, T.: Histone variant H2A.Z deposition and acetlyation directs the canonical Notch signaling response. Nucleic Acids Research (London) 46, pp. 8197 - 8215 (2018)
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Irmak, D.; Fatima, A.; Gutiérrez-Garcia, R.; Rinschen, M. M.; Wagle, P.; Altmüller, J.; Arrigoni, L.; Hummel, B.; Klein, C.; Frese, C. K. et al.; Sawarkar, R.; Rada-Iglesias, A.; Vilchez, D.: Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations. Human Molecular Genetics 27, pp. 4117 - 4134 (2018)
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Kapp, F. G.; Perlin, J. R.; Hagedorn, E. J.; Gansner, J. M.; Schwarz, D. E.; O’Connell, L. A.; Johnson, N. S.; Amemiya, C.; Fisher, D. E.; Wölfle, U. et al.; Trompouki, E.; Niemeyer, C. M.; Driever, W.; Zon, L. I.: Protection from UV light is an evolutionarily conserved feature of the haematopoietic niche. Nature 558, pp. 445 - 448 (2018)
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Klein-Geltink, R.; Kyle, R. L.; Pearce, E. L.: Unraveling the Complex Interplay Between T Cell Metabolism and Function. Annual Review of Immunology 36, pp. 461 - 488 (2018)
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Krishnan, A.; Iyer, L. M.; Holland, S. J.; Boehm, T.; Aravind, L.: Diversification of AID/APOBEC-like deaminases in metazoa: multiplicity of clades in wiedspread roles in immunity. Proceedings of the National Academy of Sciences of the United States of America 115, pp. e3201 - e3210 (2018)
Journal Article
Li, R.; Cauchy, P.; Ramamoorthy , S.; Boller, S.; Chavez, L.; Grosschedl, R.: Dynamic EBF1 occumpancy directs sequential epigenetic and transcriptional events in B-cell programming. Genes and Development 32, pp. 96 - 111 (2018)
Journal Article
Lu, T. T.-H.; Heyne, S.; Dror, E.; Casas, E.; Leonhardt, L.; Boenke, T.; Yang, C.-H.; Sagar, S.; Arrigoni, L.; Dalgaard, K. et al.; Teperino, R.; Enders, L.; Selvaraj, M.; Ruf, M.; Raja, S. J.; Xie, H.; Boenisch, U.; Orkin, S. H.; Lynn, F. C.; Hoffman, B. G.; Grün, D.; Vavouri, T.; Lempradl, A. M.; Pospisilik, J. A.: The Polycomb-Dependent Epigenome Controls β Cell Cysfunction, Dedifferentiation, and Diabetes. Cell Metabolism 15, pp. 1294 - 1308 (2018)
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Maticzka, D.; Ilik, I. A.; Aktas, T.; Backofen, R.; Akhtar, A.: uvCLAP is a fast and non-radioactive method to identify in vivo targets of RNA-binding proteins. Nature Communications 9, p. 1142 (2018)
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Musa, Y. R.; Boller, S.; Puchalska, M.; Grosschedl, R.; Mittler, G.: A comprehensive Proteomic Investigation of Ebf1 Heterozygosity in pro-B llymphocytes utilizing Data Independent Analysis (DIA). Journal of Proteome Research 17, pp. 76 - 85 (2018)
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Musa, Y. R.; Boller, S.; Puchalska, M.; Grosschedl, R.; Mittler, G.: Comprehensive Proteomic Investigation of Ebf1 Heterozygosity in Pro-B Lymphocytes Ulilizing Data Independent Acquisition. Journal of Proteome Research 17, pp. 76 - 85 (2018)
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Panzeri, I.; Pospisilik, J. A.: Epigenetic control of variation and stochasticity in metabolic disease. Molecular Metabolism 14, pp. 26 - 38 (2018)
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Pearce, E. J.; Pearce, E. L.: Immunometabolism in 2017: Driving immunity: all roads lead to metabolism. Nature Reviews Immunology 18, pp. 81 - 82 (2018)
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Pichler, A.: How DNA vicinity controls SUMO E3 ligase activity. EMBO Journal 37, p. e99705 (2018)
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Pichler, A.: How DNA vicinity controls SUMO E3 ligase activity. EMBO Journal, p. e99705 (2018)
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Piragyte, I.; Clapes, T.; Polyzou, A.; Geltink, R. I. K.; Lefkopoulos, S.; Yin, N.; Cauchy, P.; Curtis, J. D.; Klaeylé, L.; Langa, X. et al.; Beckmann, C. C. A.; Wlodarski, M. W.; Müller, P.; Essen, D. V.; Rambold, A.; Kapp, F. G.; Mione, M.; Buescher, J. M.; Pearce, E. L.; Polyzos, A.; Trompouki, E.: A metabolic interplay coordinatd by HLX regulates myeloid differentiation and AML through partly overlapping pathways. Nature Communications 9, p. 3090 (2018)
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